The detailed information of tRNA gene sequence


Sequence ID>SRA1002217
Genome IDSRR001308.308416
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 13
End posion on genome 95
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
cgggaatttt
tRNA gene sequence 
GCGGGTGTGGCGAAATTGGTAGACGCACTAGACTTAGGATCTAGCGGGTAACCATGGGGG
TTCGAGTCCCTCCACCCGCACAA
Downstream region at tRNA end position 
gtttgaatgt
Secondary structure (Cloverleaf model)
>SRA1002217	Leu	TAG
                   t      ACAA gtttgaatgt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      T A A        G      | + | | |     G
    T       A G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGGGTAACCAT
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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