The detailed information of tRNA gene sequence


Sequence ID>SRA1002220
Genome IDSRR001308.310368
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 124
End posion on genome 198
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
gggtaaacct
tRNA gene sequence 
TGGGGTATGGTGTAATTGGCAACACAGCTGATTCTGGTTCAGCCATTCTAGGTTCGAGTC
CTGGTACCCCAGCGA
Downstream region at tRNA end position 
gcgatcgccc
Secondary structure (Cloverleaf model)
>SRA1002220	Gln	CTG
                   t      GCGA gcgatcgccc
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T G
                    T     G G T C C     A
      T A A        G      | + | | |     G
    T       T G T G       C T A G G     C
    G       | | | |                 T T
    G       A C A C
      C A          A     CATT
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       T
                  T       G
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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