The detailed information of tRNA gene sequence


Sequence ID>SRA1002223
Genome IDSRR001308.313054
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 120
End posion on genome 193
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
cttcttgcac
tRNA gene sequence 
GGGCCCATAGCTCAACTGGCAGAGCAGCGGACTCTTAATCCGTTTGTTGTAGGTTCGACT
CCCACTGGGCTCACag
Downstream region at tRNA end position 
tgaaaggccg
Secondary structure (Cloverleaf model)
>SRA1002223	Lys	CTT
                   c      ACag tgaaaggccg
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T C
                    T     C A C C C     A
      C A A        A      | |   | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     TTGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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