The detailed information of tRNA gene sequence


Sequence ID>SRA1002225
Genome IDSRR001308.314638
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 165
End posion on genome 79
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ttccgcgcaa
tRNA gene sequence 
GCCTGGGTGGCGAAACCGGTAGACGCATCGGACTTAAAATCCGCCGGCCGCAAGGCCATG
AGGGTTCGAGTCCCTCCCCAGGCACCA
Downstream region at tRNA end position 
tgctcggatc
Secondary structure (Cloverleaf model)
>SRA1002225	Leu	TAA
                   a      ACCA tgctcggatc
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C
                     G - C
                     G - C          T G
                    T     C T C C C     A
      C A A        G      | | | | |     G
    C       A G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGGCCGCAAGGCCAT
                    T   C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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