The detailed information of tRNA gene sequence


Sequence ID>SRA1002226
Genome IDSRR001308.314652
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 75
End posion on genome 157
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
aggtggcgtc
tRNA gene sequence 
GGGGAGTTACCGAAGCGGTCAAACGGGTCAGACTGTAAATCTGATGGCTATGCCTTCACA
GGTTCGAATCCTGTACTCCCCACtg
Downstream region at tRNA end position 
tcagacgatt
Secondary structure (Cloverleaf model)
>SRA1002226	Tyr	GTA
                   c      ACtg tcagacgatt
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     T G T C C     A
      C G A        A      | | | | |     G
    G       A G C C       A C A G G     C
    G         | | |                 T T
    T       A C G G
      C A A        G     TGGCTATGCCTTC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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