The detailed information of tRNA gene sequence


Sequence ID>SRA1002231
Genome IDSRR001308.318523
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 137
End posion on genome 212
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
cccgtcggtc
tRNA gene sequence 
GGGTCGGTAGCTCAGTCGGTAGAGCAGCGGACTTTTAATCCGTTGGTCCCGAGTTCGAAT
CTCGGCCGACCCACCA
Downstream region at tRNA end position 
gtttcccctg
Secondary structure (Cloverleaf model)
>SRA1002231	Lys	TTT
                   c      ACCA gtttcccctg
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     G - C          T A
                    T     G G C T C     A
      T G A        A      | | | | |     G
    C       C T C G       C C G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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