The detailed information of tRNA gene sequence


Sequence ID>SRA1002232
Genome IDSRR001308.318864
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 176
End posion on genome 252
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgaatacacc
tRNA gene sequence 
AGCGTGGTAGAGAAGTTGGTTATCTCATCAGACTCATAATCTGAAGGTCGCTTGTTCGAA
TCAAGCCCTCGCTACCG
Downstream region at tRNA end position 
gtggcaannn
Secondary structure (Cloverleaf model)
>SRA1002232	Met	CAT
                   c      ACCG gtggcaannn
                     A - T
                     G - C
                     C - G
                     G - C
                     T   T
                     G - C
                     G - C          T A
                    T     C G A A C     A
      T G A        A      | | | | |     G
    T       A G A G       G C T T G     C
    G       | | | |                 T T
    G       T C T C
      T T A        A     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK