The detailed information of tRNA gene sequence


Sequence ID>SRA1002236
Genome IDSRR001308.322908
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 185
End posion on genome 260
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggcttcggtT
tRNA gene sequence 
GGTGATGTAGCTCAGATGGTTAGAGCGATGGATTCATAACCCATAGGTCGGCGGTTCGAC
TCCGCCCATCACCAAnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002236	Met	CAT
                   T      AAnn nnnnnnnnnn
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A
                     G - C          T C
                    T     C C G C C     A
      A G A        A      | | | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    A - T
                    T - A
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK