The detailed information of tRNA gene sequence


Sequence ID>SRA1002239
Genome IDSRR001308.324442
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 141
End posion on genome 216
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tcgaaaatct
tRNA gene sequence 
GCTCACGTAGCTCAGTCGGTAGAGCACCTCCTTGGTAAGGAGGAGGTCGATGGTTCGATT
CCATTCGTGAGCACCA
Downstream region at tRNA end position 
tctttagtaa
Secondary structure (Cloverleaf model)
>SRA1002239	Thr	GGT
                   t      ACCA tctttagtaa
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T
                     C - G
                     G - C          T T
                    T     T T A C C     A
      T G A        A      + | | | |     G
    C       C T C G       G A T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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