The detailed information of tRNA gene sequence


Sequence ID>SRA1002244
Genome IDSRR001308.325557
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 7
End posion on genome 82
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
nnnngtccgt
tRNA gene sequence 
GCCGATTTAGCTCAGTTGGTAGAGCAACCGCCTTGTAAGCGGTAGGTCATCAGTTCGAAT
CCGATAATCGGCACCA
Downstream region at tRNA end position 
ccgcgatggt
Secondary structure (Cloverleaf model)
>SRA1002244	Thr	TGT
                   t      ACCA ccgcgatggt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     T - A
                     T - A          T A
                    T     T A G C C     A
      T G A        A      | | |   |     G
    T       C T C G       A T C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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