The detailed information of tRNA gene sequence


Sequence ID>SRA1002246
Genome IDSRR001308.326326
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 196
End posion on genome 268
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
acgctaccga
tRNA gene sequence 
GGGCGATTGGTCTAGTGGTATGATTCTTGTTTCGGGTACAAGAGGTCCCGGGTTCAATTC
CCGGATCGCCCCCtt
Downstream region at tRNA end position 
tttggactat
Secondary structure (Cloverleaf model)
>SRA1002246	Pro	CGG
                   a      CCtt tttggactat
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T T
                    T     G G C C C     A
        G A        G      | | | | |     A
      T     T C T G       C C G G G     C
      G       | | +                 T T
      G     T G A T
        T A        T     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    T - A
                  T       T
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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