The detailed information of tRNA gene sequence


Sequence ID>SRA1002252
Genome IDSRR001308.328943
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 177
End posion on genome 249
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
gtggtacacc
tRNA gene sequence 
GGATCGGTAGCCTAACGGTCAGGCAGCAAGCTGTTAACTTGCCGTACGTGGGTTCAACTC
CCTCCCGGTCCTCtg
Downstream region at tRNA end position 
atccgctcaa
Secondary structure (Cloverleaf model)
>SRA1002252	Asn	GTT
                   c      TCtg atccgctcaa
                     G - C
                     G - C
                     A - T
                     T + G
                     C - G
                     G - C
                     G - C          T C
                    T     C T C C C     A
        A A        A      |   | | |     A
      C     T C C G       G T G G G     C
      G     | | | |                 T T
      G     A G G C
        T C        A     CGTAC
                    G - C
                    C - G
                    A - T
                    A - T
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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