The detailed information of tRNA gene sequence


Sequence ID>SRA1002253
Genome IDSRR001308.329843
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 162
End posion on genome 90
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
tcttccaaaa
tRNA gene sequence 
GGCCTCGTAGTACAATGGATAGTATAAGAGTTTCCGAAGCTCCAGATCCAGGTTCGATTC
CTGGCGAGGCCACat
Downstream region at tRNA end position 
tgttagttta
Secondary structure (Cloverleaf model)
>SRA1002253	Arg	CCG
                   a      ACat tgttagttta
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C          T T
                    T     G G T C C     A
      T A A        A      | | | | |     G
    G       C A T G       C C A G G     C
    G       | | | +                 T T
    A       G T A T
      T A          A     AGAT
                    A   C
                    G - C
                    A - T
                    G - C
                    T + G
                  T       A
                  T       A
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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