The detailed information of tRNA gene sequence


Sequence ID>SRA1002254
Genome IDSRR001308.330015
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 215
End posion on genome 141
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ncgggcccat
tRNA gene sequence 
CTCTCCGTAGTTCAATGGATAGAACGAGCGCCTCCTAAGCGCTAGATACAGGTTCGATTC
CTNTCGGGGGGACCA
Downstream region at tRNA end position 
gccacttacg
Secondary structure (Cloverleaf model)
>SRA1002254	Arg	CCT
                   t      ACCA gccacttacg
                     C - G
                     T + G
                     C - G
                     T + G
                     C - G
                     C - G
                     G - C          T T
                    T     T N T C C     A
      T A A        A      |   | | |     G
    G       C T T G       A C A G G     C
    G       | | | |                 T T
    A       G A A C
      T A          G     AGAT
                    A - T
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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