The detailed information of tRNA gene sequence


Sequence ID>SRA1002260
Genome IDSRR001308.331715
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 152
End posion on genome 68
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
cgcccccgtt
tRNA gene sequence 
GCCCAGGTGGCGGAATTGGTAGACGCGCTGGTTTCAGGTACCAGTGGTGAAAGCCGTGGA
GGTTCGAGTCCTCTCCTGGGCACCA
Downstream region at tRNA end position 
ttgcctttct
Secondary structure (Cloverleaf model)
>SRA1002260	Leu	CAG
                   t      ACCA ttgcctttct
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C          T G
                    T     T C T C C     A
      T A A        G      + | | | |     G
    T       G G C G       G G A G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGGTGAAAGCCGT
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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