The detailed information of tRNA gene sequence


Sequence ID>SRA1002265
Genome IDSRR001308.333448
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 163
End posion on genome 236
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
ggctcccggt
tRNA gene sequence 
GCGGGAGTAGTTCAATGGTAGAACTGTAGCCTTCCAAGCTACTAGCGCGGGTTCGATTCC
CGTCTCCCGCTCCA
Downstream region at tRNA end position 
ccattgcacc
Secondary structure (Cloverleaf model)
>SRA1002265	Gly	TCC
                   t      TCCA ccattgcacc
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T T
                    T     T G C C C     A
        A A        A      + | | | |     G
      T     C T T G       G C G G G     C
      G     | | | |                 T T
      G     G A A C
        T A        T     TAGC
                    G - C
                    T - A
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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