The detailed information of tRNA gene sequence


Sequence ID>SRA1002267
Genome IDSRR001308.335392
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 45
End posion on genome 119
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cccggtttgt
tRNA gene sequence 
GCGAGGTTAGCTCAGTGGTAGAGCACTTGCTTCACACGCAAGGGGTCGCAGGTTCGAAAC
CTGCACCTCGCACCA
Downstream region at tRNA end position 
ttttccttct
Secondary structure (Cloverleaf model)
>SRA1002267	Val	CAC
                   t      ACCA ttttccttct
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A          A A
                    T     C G T C C     A
        G A        A      | | | | |     G
      T     C T C G       G C A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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