The detailed information of tRNA gene sequence


Sequence ID>SRA1002268
Genome IDSRR001308.335447
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 228
End posion on genome 154
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
ttcattctat
tRNA gene sequence 
TCCCCGATAGCTCAGCGGTAGAGCAACCGGCTGTTAACCGGTAGGTCATAGGTTCGAATC
CTATTCGGGGAGCCA
Downstream region at tRNA end position 
caatgtacga
Secondary structure (Cloverleaf model)
>SRA1002268	Asn	GTT
                   t      GCCA caatgtacga
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T          T A
                    T     T A T C C     A
        G A        A      | | | | |     G
      C     C T C G       A T A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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