The detailed information of tRNA gene sequence


Sequence ID>SRA1002269
Genome IDSRR001308.337342
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 185
End posion on genome 109
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
gcaggcgtgt
tRNA gene sequence 
GCAGTTGTAGCTCAGTTGGTTAGAGCGCCGGATTGTGGATCCGGAGGTCGGTGGTTCAAG
CCCACCCAACTGTACCA
Downstream region at tRNA end position 
ctcttattca
Secondary structure (Cloverleaf model)
>SRA1002269	His	GTG
                   t      ACCA ctcttattca
                     G + T
                     C - G
                     A - T
                     G - C
                     T - A
                     T - A
                     G - C          C G
                    T     C C A C C     A
      T G A        A      | | | | |     A
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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