The detailed information of tRNA gene sequence


Sequence ID>SRA1002271
Genome IDSRR001308.338934
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 58
End posion on genome 135
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
acggcgcgtT
tRNA gene sequence 
GCTCCCGTAGCTCAGCTGGATAGAGCATTAGCCTTCTAAGCTAAGGGTCGCTGGTTCGAG
TCCAGCCGGGGGCGTCA
Downstream region at tRNA end position 
actttagaca
Secondary structure (Cloverleaf model)
>SRA1002271	Arg	TCT
                   T      GTCA actttagaca
                     G - C
                     C - G
                     T + G
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C G A C C     A
      C G A        A      | | | | |     G
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTC
                    T - A
                    T - A
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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