The detailed information of tRNA gene sequence


Sequence ID>SRA1002273
Genome IDSRR001308.341279
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 261
End posion on genome 177
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
ttacaaaatt
tRNA gene sequence 
GCCCAGATGATGAAATTGGTAGACATGCTACTTTGAGGTGGTAGTGACCGTAAGGTTGTG
CAGGTTCGAATCCTGTTTTGGGCACtt
Downstream region at tRNA end position 
tctatttttt
Secondary structure (Cloverleaf model)
>SRA1002273	Leu	GAG
                   t      ACtt tctatttttt
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G + T
                     A - T          T A
                    T     T G T C C     A
      T A A        G      + | | | |     G
    T       A G T A       G C A G G     C
    G         | | |                 T T
    G       A C A T
      T A G        G     TGACCGTAAGGTTGT
                    C - G
                    T - A
                    A - T
                    C - G
                    T + G
                  T       T
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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