The detailed information of tRNA gene sequence


Sequence ID>SRA1002277
Genome IDSRR001308.343667
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 105
End posion on genome 178
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tcgcgctttt
tRNA gene sequence 
GGGGCTGTAGCTCAGCTGGTAGAGCGCTTGAATGGCATTCAAGAGGCCAGGGGTTCGACT
CCCCTCAGCTCCACtc
Downstream region at tRNA end position 
gaaaccccgt
Secondary structure (Cloverleaf model)
>SRA1002277	Ala	GGC
                   t      ACtc gaaaccccgt
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T C
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGCC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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