The detailed information of tRNA gene sequence


Sequence ID>SRA1002281
Genome IDSRR001308.345538
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 38
End posion on genome 125
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tggcattccc
tRNA gene sequence 
GGAGAGGTCGCATAGTGGTCTAGTGCGCCGCACTCGAAATGCGGTGTGGGGCAACTCACC
GTGGGTTCGAATCCCACCCTCTCCTCCA
Downstream region at tRNA end position 
ggttcctcca
Secondary structure (Cloverleaf model)
>SRA1002281	Ser	CGA
                   c      TCCA ggttcctcca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G T G G G     C
    G       + | | |                 T T
    T       G T G C
      C T A        G     TGTGGGGCAACTCACC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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