The detailed information of tRNA gene sequence


Sequence ID>SRA1002285
Genome IDSRR001308.347611
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 31
End posion on genome 116
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
tgttcttcgt
tRNA gene sequence 
GGAGGGGTGCCCGAGTGGCTAAAGGGGGCAGACTGTAAATCTGTTGGCTTACGCCTACGC
TGGTTCGAATCCAGCCTCCTCCACCA
Downstream region at tRNA end position 
gaagtttgaa
Secondary structure (Cloverleaf model)
>SRA1002285	Tyr	GTA
                   t      ACCA gaagtttgaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     C G A C C     A
      T G A        G      | | | | |     G
    G       G C C C       G C T G G     C
    G         | | |                 T T
    C       A G G G
      T A A        G     TGGCTTACGCCTAC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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