The detailed information of tRNA gene sequence


Sequence ID>SRA1002295
Genome IDSRR001308.355035
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 131
End posion on genome 45
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
aatattccag
tRNA gene sequence 
GCCGGAGTGGCGAAATTGGTAGACGCGCCAGACTCAAAATCTGGTAGTGGCAACACTGTG
TCGGTTCGAGTCCGACCTCCGGCACCA
Downstream region at tRNA end position 
tatccgcgct
Secondary structure (Cloverleaf model)
>SRA1002295	Leu	CAA
                   g      ACCA tatccgcgct
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C A G C C     A
      T A A        G      | | | | |     G
    T       A G C G       G T C G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TAGTGGCAACACTGT
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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