The detailed information of tRNA gene sequence


Sequence ID>SRA1002306
Genome IDSRR001308.366229
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 188
End posion on genome 111
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acaatgaaaa
tRNA gene sequence 
CGCGCTGTGGAGTAGTCAGGCTAACTCGTCAGGCTCATAACCTGAAGGTCGCCGGTTCAA
ATCCGGCTGGCGCAACCA
Downstream region at tRNA end position 
acacagtcga
Secondary structure (Cloverleaf model)
>SRA1002306	Met	CAT
                   a      ACCA acacagtcga
                     C   A
                     G - C
                     C - G
                     G - C
                     C - G
                     T + G
                     G + T          T A
                    T     C G G C C     A
    C T G A        G      | | | | |     A
  A         T G A G       G C C G G     C
  G         | | | |                 T T
  G         A C T C
    C T A          G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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