The detailed information of tRNA gene sequence


Sequence ID>SRA1002310
Genome IDSRR001308.369796
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 244
End posion on genome 168
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
gcaaacaatN
tRNA gene sequence 
CGGGGAATAGCTCAGTTGGTAGAGCGCAACCTTGCCAAGGTTGAGGTCGAGAGTTCGAGA
CTCTTTTCCCGCTCC
Downstream region at tRNA end position 
Agattccgcg
Secondary structure (Cloverleaf model)
>SRA1002310	Gly	GCC
                   N      CTCC Agattccgcg
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T
                     A - T
                     A - T          G A
                    T     T C T C A     G
      T G A        A        | | |       C
    T       C T C G       C G A G A     T
    G       | | | |                 G T
    G       G A G C
      T A          G     AGGT
                    C - G
                    A - T
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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