The detailed information of tRNA gene sequence


Sequence ID>SRA1002311
Genome IDSRR001308.369796
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 113
End posion on genome 40
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gcgaaggttt
tRNA gene sequence 
GGCGCGGTAGCAAAGCGGTTATGCCCCGGATTGCAAATCCGGTTAGTCCGGTTCGACTCC
GGACCGCGCCTCCA
Downstream region at tRNA end position 
gaacctcgat
Secondary structure (Cloverleaf model)
>SRA1002311	Cys	GCA
                   t      TCCA gaacctcgat
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T C
                    T     A G G C C     A
        G A        A      | | | | |     G
      C     A A C G       T C C G G     C
      G       | | |                 T T
      G     A T G C
        T T        C     TTAG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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