The detailed information of tRNA gene sequence


Sequence ID>SRA1002315
Genome IDSRR001308.371110
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 146
End posion on genome 75
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
tttggttttg
tRNA gene sequence 
GGAGGTGTGGTGCAAAGGCAGCATGTGAGACTTCGGATCTCCTGATCGGGGTTCAATTCC
CCGCACCTTCTCtt
Downstream region at tRNA end position 
gaggttttct
Secondary structure (Cloverleaf model)
>SRA1002315	Arg	TCG
                   g      TCtt gaggttttct
                     G - C
                     G + T
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     G C C C C     A
        A A        G      | | | | |     A
      A     C G T G       C G G G G     C
      G     | | | +                 T T
      G     G C A T
        C A        G     TGAT
                    T   C
                    G - C
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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