The detailed information of tRNA gene sequence


Sequence ID>SRA1002316
Genome IDSRR001308.371231
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 78
End posion on genome 164
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ccaagtgttt
tRNA gene sequence 
GCTCGGATGGTGAAATTGGTAGACACGCTGGACTTAAAATCCAGTGAACAGCAATGTTCG
TGCGGGTTCAAGTCCCGCTCTGAGTACag
Downstream region at tRNA end position 
acgccccaaa
Secondary structure (Cloverleaf model)
>SRA1002316	Leu	TAA
                   t      ACag acgccccaaa
                     G + T
                     C - G
                     T - A
                     C - G
                     G + T
                     G - C
                     A - T          T G
                    T     C G C C C     A
      T A A        G      | | | | |     A
    T       A G T G       G C G G G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGAACAGCAATGTTCGT
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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