The detailed information of tRNA gene sequence


Sequence ID>W1810089639
Genome IDPGEV01000001
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAfipia broomeae GAS525 [PGEV]
Start position on genome 7735883
End posion on genome 7735788
Amino Acid Sec
Anticodon TCA
Upstream region at tRNA start position 
tgaggacaat
tRNA gene sequence 
GGGAGAGAATCGTCCCTGGTGGGGCGTTCGGACTTCAAATCCGAGTGAGGCAGCGAGCCT
GTCTCTGGTGGGTTCGACTCCCGCTCTCTTCCGCCA
Downstream region at tRNA end position 
actgcacatc
Secondary structure (Cloverleaf model)
>W1810089639	Sec	TCA
                   t      GCCA actgcacatc
                     G - C
                     G - C
                     G + T
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T C
                    A     C G C C C     A
      T C C        T      | + | | |     G
    G       C T G C       G T G G G     C
    G       | + | |                 T T
    T       G G C G
      G G          T     GTGAGGCAGCGAGCCTGTCTCTG
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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