The detailed information of tRNA gene sequence


Sequence ID>SRA1002328
Genome IDSRR001308.376906
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 160
End posion on genome 236
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
gtcgagtcat
tRNA gene sequence 
CGGGCTGTAGCGTAGTCTGGTAGCGCGCTTGCATGGGGTGCAAGAGGTCGTGAGTTCGAA
TCTCACCAGCCCGACCA
Downstream region at tRNA end position 
tttttcccag
Secondary structure (Cloverleaf model)
>SRA1002328	Pro	GGG
                   t      ACCA tttttcccag
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     C A C T C     A
      T G A        A      | | | | |     G
    C       T G C G       G T G A G     C
    T       + | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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