The detailed information of tRNA gene sequence


Sequence ID>SRA1002329
Genome IDSRR001308.377594
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 8
End posion on genome 96
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
nnnagtttat
tRNA gene sequence 
GGAGAGGTGGCAGAGCGGTTGAATGTACCTGACTCGAAATCAGGCGTAGGTGTGAGCCTA
CCGGGGTTCGAATCCCCCCTTCTCCGCCA
Downstream region at tRNA end position 
taaataaaaa
Secondary structure (Cloverleaf model)
>SRA1002329	Ser	CGA
                   t      GCCA taaataaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C C C C C     A
      C G A        G        | | | |     G
    G       G A C G       C G G G G     C
    G         | | +                 T T
    T       A T G T
      T G A        A     CGTAGGTGTGAGCCTAC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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