The detailed information of tRNA gene sequence


Sequence ID>SRA1002332
Genome IDSRR001322.9121
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 35
End posion on genome 111
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ggaacttgaT
tRNA gene sequence 
GCCCTGGTAGTATAGTCCGGTCTAGTATAAGCGGCTGTCGCCCGCTTGACCCGGGTTCAA
ATCCCGGCCAAGGGGAga
Downstream region at tRNA end position 
gaaaagnnnn
Secondary structure (Cloverleaf model)
>SRA1002332	Asp	GTC
                   T      GAga gaaaagnnnn
                     G   G
                     C - G
                     C - G
                     C   A
                     T - A
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C T G A        A      | | | | |     A
  C         T A T G       C C G G G     C
  G         + | | +                 T T
  G         G T A T
    T C T A        A     TGAC
                    A - T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       C
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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