The detailed information of tRNA gene sequence


Sequence ID>SRA1002333
Genome IDSRR001322.11634
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 15
End posion on genome 87
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ctaaaaattt
tRNA gene sequence 
GCTGGCGTAGCTCAGAGGTAGAGCAAGCGCCTTGTAAGCGCTAGGTCGGGGGTTCGAATC
CCTCCGCCAGCTCgg
Downstream region at tRNA end position 
tgagcaaatt
Secondary structure (Cloverleaf model)
>SRA1002333	Thr	TGT
                   t      TCgg tgagcaaatt
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T C C C     A
        G A        A      | + | | |     G
      A     C T C G       G G G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    A - T
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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