The detailed information of tRNA gene sequence


Sequence ID>SRA1002335
Genome IDSRR001322.15936
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 14
End posion on genome 90
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aggctcataa
tRNA gene sequence 
GCCGAGGTGACAGAGTCCGGTGATGTGATGGCCTGCAGAGCCATTTAATAGGGGTTCGAA
TCCCCTCCTCGGCTCCA
Downstream region at tRNA end position 
aaagaagcgt
Secondary structure (Cloverleaf model)
>SRA1002335	Cys	GCA
                   a      TCCA aaagaagcgt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T C C C C     A
      T G A        G      | | | | |     G
    C       G A C A       A G G G G     C
    C         | | |                 T T
    G       A T G T
      G T G        G     TTAAT
                    A - T
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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