The detailed information of tRNA gene sequence


Sequence ID>SRA1002337
Genome IDSRR001322.18021
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 89
End posion on genome 13
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tagcttcaat
tRNA gene sequence 
AGGAGTGTAGCTCAGTTTGGTAGAGCAGCGGTCTCCAAAACCGCAGGTCGGGGGTTCGAG
TCCTCCCACTCCTGCCA
Downstream region at tRNA end position 
gttttagctt
Secondary structure (Cloverleaf model)
>SRA1002337	Trp	CCA
                   t      GCCA gttttagctt
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     C C T C C     A
      T G A        A      | | + | |     G
    T       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     AGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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