The detailed information of tRNA gene sequence


Sequence ID>SRA1002339
Genome IDSRR001322.22339
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 76
End posion on genome 1
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gactccgtgt
tRNA gene sequence 
GGGCCGGTAGTTCAGCTTGGTATGAACGCCTGGCTTGCATCCAGGAGGACGCGGGTTCAA
ATCCCGCCCGGTCCACnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002339	Ala	TGC
                   t      ACnn nnnnnnnnnn
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C G C C C     A
    T C G A        A      | | | | |     A
  T         C T T G       G C G G G     C
  G         | | | |                 T T
  G         G A A C
    T A T          G     AGGAC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  C       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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