The detailed information of tRNA gene sequence


Sequence ID>SRA1002340
Genome IDSRR001322.27018
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 92
End posion on genome 2
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agtaataaga
tRNA gene sequence 
GGAGAGGTGACCGAGTGGACGAAGGTGCATGCCTGGAGAGCATGTGTACGGTTTATCTGT
ACCCTGGGTTCGAATCCCAGCCTCTCCGTCA
Downstream region at tRNA end position 
gnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002340	Ser	GGA
                   a      GTCA gnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G A C C C     A
      T G A        G      | | | | |     G
    G       G C C A       C T G G G     C
    G         | | |                 T T
    A       A G G T
      C G A        G     TGTACGGTTTATCTGTACC
                    C - G
                    A - T
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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