The detailed information of tRNA gene sequence


Sequence ID>SRA1002350
Genome IDSRR001322.53428
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 83
End posion on genome 5
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aaactcatgT
tRNA gene sequence 
GGGCCGGTAGTCCAGCGTGGTTAAGACGTCGCCCTCACGCGGCGAAGATCGCCGGTTCAA
ATCCGGCCCGGCCCATCA
Downstream region at tRNA end position 
ttcannnnnn
Secondary structure (Cloverleaf model)
>SRA1002350	Val	CAC
                   T      ATCA ttcannnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C G G C C     A
    G C G A        A      | | | | |     A
  T         C C T G       G C C G G     C
  G           | | |                 T T
  G         A G A C
    T T A          G     AGATC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       G
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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