The detailed information of tRNA gene sequence


Sequence ID>SRA1002351
Genome IDSRR001322.54555
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 27
End posion on genome 102
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atagcagtgt
tRNA gene sequence 
CGCGGGGTAGAGTAGGTGGTCAACTCAACGGCCTCATGAGCCGGTTATGTGGGTTCGATT
CCCACCCCCGCTACCA
Downstream region at tRNA end position 
aacatagagg
Secondary structure (Cloverleaf model)
>SRA1002351	Met	CAT
                   t      ACCA aacatagagg
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T T
                    T     C A C C C     A
      G G A        A      | | | | |     G
    T       T G A G       G T G G G     C
    G       | | | |                 T T
    G       A C T C
      T C A        A     TTAT
                    A   G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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