The detailed information of tRNA gene sequence


Sequence ID>SRA1002353
Genome IDSRR001322.58866
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 28
End posion on genome 104
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggaagaatgA
tRNA gene sequence 
AGCGAGGTGGCTCAGTTAGGTTAGGGCGCAAGCCTCATGAGCTTGTGGTCGCCGGTTCAA
ATCCGGCCCTCGCTTTnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002353	Met	CAT
                   A      TTnn nnnnnnnnnn
                     A - T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G G C C     A
    T T G A        G      | | | | |     A
  A         C T C G       G C C G G     C
  G         | + | |                 T T
  G         G G G C
    T T A          G     TGGTC
                    C - G
                    A - T
                    A - T
                    G - C
                    C - G
                  C       A
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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