The detailed information of tRNA gene sequence


Sequence ID>SRA1002356
Genome IDSRR001322.65658
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 21
End posion on genome 96
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tggccaaaca
tRNA gene sequence 
GCCCTGGTAGTATAGTCCGGTCTAGTATAGGCGGCTGTCGCCCGCCCGACCCGGGTTCAA
ATCCCGGCCAGGGCGCtt
Downstream region at tRNA end position 
tttagtttta
Secondary structure (Cloverleaf model)
>SRA1002356	Asp	GTC
                   a      GCtt tttagtttta
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C T G A        A      | | | | |     A
  C         T A T G       C C G G G     C
  G         + | | +                 T T
  G         G T A T
    T C T A        A     CGAC
                    G - C
                    G - C
                    C - G
                    G - C
                    G - C
                  C       C
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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