The detailed information of tRNA gene sequence


Sequence ID>SRA1002360
Genome IDSRR001322.70647
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 9
End posion on genome 84
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
nncgggagct
tRNA gene sequence 
GGGCGGGTAGCCTAGCCAGGATAGGGCACGAGCCTCCTAAGCTCGGGGTCGCGGGTTCAA
ATCCCGCCCCGCCCGCat
Downstream region at tRNA end position 
ttttgagcag
Secondary structure (Cloverleaf model)
>SRA1002360	Arg	CCT
                   t      GCat ttttgagcag
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
    C C G A        A      | | | | |     A
  A         T C C G       G C G G G     C
  G         + | | |                 T T
  G         G G G C
    A T A          A     GGGTC
                    C - G
                    G - C
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK