The detailed information of tRNA gene sequence


Sequence ID>SRA1002365
Genome IDSRR001322.80998
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 86
End posion on genome 13
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tatagcgagc
tRNA gene sequence 
GCCAGGGTGGCCGAACGGTTCAGGCGGCGGCCTGCAGAGCCGCTATATATGGGTTCAACT
CCCATCCCTGGCTCtt
Downstream region at tRNA end position 
tgatgttaga
Secondary structure (Cloverleaf model)
>SRA1002365	Cys	GCA
                   c      TCtt tgatgttaga
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T C
                    T     T A C C C     A
      C A A        G      | | | | |     A
    G       G C C G       A T G G G     C
    G         | | |                 T T
    T       A G G C
      T C          G     TATAT
                    G - C
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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