The detailed information of tRNA gene sequence


Sequence ID>SRA1002366
Genome IDSRR001322.84452
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 48
End posion on genome 119
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctcccgcttc
tRNA gene sequence 
GGGCCCATAGCTCAGCGGAAGAGCGGCCGGCTCATAACCGGTTGGTCCTAGGTTCGAATC
CTGGTGGGCCCAnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002366	Met	CAT
                   c      Annn nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     G G T C C     A
        G A        A      | + | | |     G
      C     C T C G       C T A G G     C
      G     | | | |                 T T
      G     G A G C
        A A        G     TGGTC
                    G + T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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