The detailed information of tRNA gene sequence


Sequence ID>SRA1002369
Genome IDSRR001322.95722
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 96
End posion on genome 9
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agttaccttt
tRNA gene sequence 
GCGGGGTTGCCCTAGCCTGGTAGGGGGCAGGCCTGCTAAGCCTGTGGCCTTTCAGGCCGC
GCGGGTTCAAATCCCGCACCCCGCGCCA
Downstream region at tRNA end position 
tcccttctnn
Secondary structure (Cloverleaf model)
>SRA1002369	Ser	GCT
                   t      GCCA tcccttctnn
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     C G C C C     A
      C G A        G      | | | | |     A
    C       T C C C       G C G G G     C
    T       + | | |                 T T
    G       G G G G
      G T A        G     TGGCCTTTCAGGCCGC
                    C - G
                    A - T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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