The detailed information of tRNA gene sequence


Sequence ID>SRA1002377
Genome IDSRR001322.119123
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 41
End posion on genome 115
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ctacgatttT
tRNA gene sequence 
GGGCGGTTAGCTCAGCGGTTAGAGCGCTTGCTTCACACGCAAGAGGTCACTGGTTCAAGT
CCAGTATCGCCCAGnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002377	Val	CAC
                   T      AGnn nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G + T
                     T - A          T G
                    T     T G A C C     A
      C G A        A      | | | | |     A
    G       C T C G       A C T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK