The detailed information of tRNA gene sequence


Sequence ID>SRA1002382
Genome IDSRR001323.10432
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 6
End posion on genome 83
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
nnnnnagttt
tRNA gene sequence 
GGGGCTGTCGGCTAGCTTGGTCTAGGCTATGAGCCTCGGGCGCTCGTGACGGGAGTTCGA
ATCTCCCCAGCCCCACCA
Downstream region at tRNA end position 
aaatctagta
Secondary structure (Cloverleaf model)
>SRA1002382	Pro	CGG
                   t      ACCA aaatctagta
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     C C C T C     A
    T C G A        C      | | | | |     G
  T         T C G G       G G G A G     C
  G         + | | +                 T T
  G         G G C T
    T C T A        A     TGAC
                    T + G
                    G - C
                    A - T
                    G - C
                    C - G
                  C       C
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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