The detailed information of tRNA gene sequence


Sequence ID>SRA1002385
Genome IDSRR001323.27551
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 75
End posion on genome -1
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
attcttgttt
tRNA gene sequence 
GGGCCCGTAGCCTAGTTTGGATTAAGGCGCTGGCCTTCGGAGCCGGAGAACAGGGGTTCA
AATCCCCTCGGGCCCNNnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002385	Arg	TCG
                   t      NNnn nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T C C C C     A
    T T G A        A      | | | | |     A
  T         T C C G       A G G G G     C
  G         | | | |                 T T
  G         A G G C
    A T T A        G     AGAAC
                    C - G
                    T + G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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